How strange! I have had this problem converting on two different machines.
I have tested the latest version of Haali some time, you think there is any relation to this problem?
[02/22/14] Checking System Settings
- BD-Rebuilder v0.46.13 (beta)
- Windows Version: 6.1 [7601]
- Working Path Free Space: 539,50GB
- AVISYNTH Version: 2.5.8.0, Ok
- HAALI Splitter: Isn't recommended version
- FFDSHOW: 4515, Ok
- WIN7 preferred AVC CODEC: Ok
- WIN7 preferred VC-1 CODEC: Ok
- WIN7 preferred MPEG2 CODEC: Ok
- FFDSHOW VC-1 set to "wmv9", Ok
- FFDSHOW MPEG2 set to "libavcodec": Ok
- FFDSHOW AVC set to "libavcodec": Ok
- AnyDVD settings check: Ok.
- X264: Ok
- AFTEN: Ok
- FAAC: Ok
- WAVI: Ok
- TSMUXER: Ok
- FRIMEncode: Ok
- FRIMDecode: Ok
[02/22/14] Systems Settings Check complete