No problem here with v0.152.2851 64-bit.
Are you sure that your Avisynth is correctly installed ? It is possible that x264 crashes because Avisynth sends a bad frame or issues an error not correctly handled by x264. Also, I recommend to use only the "standard" Avisynth v2.60. Other versions can have many bugs or subtle differences gthat can be incompatible with BD3D2MK3D.
Another possible cause of crash is a bad BD, possibly with a read-error, or a BD not correctly decrypted. But of course, it the encoding crashes with several BDs, you can exclude this case.
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